Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.5■□□□□ 0.71
PCP4L1A6NKN8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.5■□□□□ 0.71
PCP4L1A6NKN8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCP4L1A6NKN8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCP4L1A6NKN8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCP4L1A6NKN8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.48■□□□□ 0.71
PCP4L1A6NKN8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCP4L1A6NKN8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCP4L1A6NKN8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCP4L1A6NKN8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCP4L1A6NKN8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCP4L1A6NKN8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCP4L1A6NKN8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCP4L1A6NKN8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCP4L1A6NKN8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCP4L1A6NKN8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCP4L1A6NKN8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCP4L1A6NKN8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCP4L1A6NKN8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCP4L1A6NKN8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.45■□□□□ 0.7
PCP4L1A6NKN8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCP4L1A6NKN8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PCP4L1A6NKN8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCP4L1A6NKN8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCP4L1A6NKN8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.44■□□□□ 0.7
PCP4L1A6NKN8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCP4L1A6NKN8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCP4L1A6NKN8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCP4L1A6NKN8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCP4L1A6NKN8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCP4L1A6NKN8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCP4L1A6NKN8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCP4L1A6NKN8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCP4L1A6NKN8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCP4L1A6NKN8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCP4L1A6NKN8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCP4L1A6NKN8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCP4L1A6NKN8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCP4L1A6NKN8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCP4L1A6NKN8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.39■□□□□ 0.7
PCP4L1A6NKN8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCP4L1A6NKN8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCP4L1A6NKN8 AC120057.4-201ENST00000624722 1615 ntBASIC19.39■□□□□ 0.69
PCP4L1A6NKN8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCP4L1A6NKN8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCP4L1A6NKN8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCP4L1A6NKN8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCP4L1A6NKN8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCP4L1A6NKN8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCP4L1A6NKN8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.35■□□□□ 0.69
PCP4L1A6NKN8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms