Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TCRBV3S1A0A5B6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TCRBV3S1A0A5B6 AC138932.3-201ENST00000567634 1902 ntBASIC23.05■■□□□ 1.28
TCRBV3S1A0A5B6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TCRBV3S1A0A5B6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
TCRBV3S1A0A5B6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 AC022211.4-201ENST00000625094 2161 ntBASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV3S1A0A5B6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.03■■□□□ 1.28
TCRBV3S1A0A5B6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV3S1A0A5B6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV3S1A0A5B6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCRBV3S1A0A5B6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TCRBV3S1A0A5B6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.02■■□□□ 1.28
TCRBV3S1A0A5B6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
TCRBV3S1A0A5B6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TCRBV3S1A0A5B6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV3S1A0A5B6 WHAMMP3-201ENST00000611636 1609 ntBASIC23.01■■□□□ 1.27
TCRBV3S1A0A5B6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV3S1A0A5B6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TCRBV3S1A0A5B6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV3S1A0A5B6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV3S1A0A5B6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCRBV3S1A0A5B6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23■■□□□ 1.27
TCRBV3S1A0A5B6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCRBV3S1A0A5B6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23■■□□□ 1.27
TCRBV3S1A0A5B6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 MIR762-201ENST00000390236 83 ntBASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV3S1A0A5B6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TCRBV3S1A0A5B6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TCRBV3S1A0A5B6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TCRBV3S1A0A5B6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV3S1A0A5B6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV3S1A0A5B6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV3S1A0A5B6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV3S1A0A5B6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TCRBV3S1A0A5B6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV3S1A0A5B6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV3S1A0A5B6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.95■■□□□ 1.26
TCRBV3S1A0A5B6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.95■■□□□ 1.26
TCRBV3S1A0A5B6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.95■■□□□ 1.26
TCRBV3S1A0A5B6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV3S1A0A5B6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.95■■□□□ 1.26
TCRBV3S1A0A5B6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV3S1A0A5B6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV3S1A0A5B6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV3S1A0A5B6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV3S1A0A5B6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
TCRBV3S1A0A5B6 AC136428.2-201ENST00000563187 214 ntBASIC22.93■■□□□ 1.26
TCRBV3S1A0A5B6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV3S1A0A5B6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
TCRBV3S1A0A5B6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV3S1A0A5B6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.93■■□□□ 1.26
TCRBV3S1A0A5B6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.92■■□□□ 1.26
TCRBV3S1A0A5B6 AC108673.1-201ENST00000510422 1159 ntBASIC22.91■■□□□ 1.26
TCRBV3S1A0A5B6 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.91■■□□□ 1.26
TCRBV3S1A0A5B6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
TCRBV3S1A0A5B6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.9■■□□□ 1.26
TCRBV3S1A0A5B6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.9■■□□□ 1.26
TCRBV3S1A0A5B6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.9■■□□□ 1.26
TCRBV3S1A0A5B6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.9■■□□□ 1.26
TCRBV3S1A0A5B6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV3S1A0A5B6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV3S1A0A5B6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV3S1A0A5B6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.89■■□□□ 1.25
TCRBV3S1A0A5B6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.89■■□□□ 1.25
TCRBV3S1A0A5B6 AC133561.1-201ENST00000568600 2415 ntBASIC22.89■■□□□ 1.25
TCRBV3S1A0A5B6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.89■■□□□ 1.25
TCRBV3S1A0A5B6 MIR6090-201ENST00000622481 60 ntBASIC22.88■■□□□ 1.25
TCRBV3S1A0A5B6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms