Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AP004609.3-201ENST00000610705 1884 ntBASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-2A0A0B4J235 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-2A0A0B4J235 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 PKD1P6-201ENST00000343738 4769 ntBASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV13-2A0A0B4J235 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-2A0A0B4J235 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV13-2A0A0B4J235 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-2A0A0B4J235 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-2A0A0B4J235 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-2A0A0B4J235 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV13-2A0A0B4J235 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV13-2A0A0B4J235 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-2A0A0B4J235 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-2A0A0B4J235 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-2A0A0B4J235 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV13-2A0A0B4J235 ZNRF2P1-201ENST00000441407 443 ntBASIC16.08■□□□□ 0.16
TRAV13-2A0A0B4J235 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.08■□□□□ 0.16
TRAV13-2A0A0B4J235 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV13-2A0A0B4J235 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-2A0A0B4J235 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 AL133380.1-201ENST00000506013 324 ntBASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-2A0A0B4J235 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 AL139125.2-201ENST00000623134 1869 ntBASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 AC133561.1-201ENST00000568600 2415 ntBASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-2A0A0B4J235 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-2A0A0B4J235 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-2A0A0B4J235 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV13-2A0A0B4J235 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms