Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-1A0A0A6YYK1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV8-1A0A0A6YYK1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-1A0A0A6YYK1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV8-1A0A0A6YYK1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV8-1A0A0A6YYK1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV8-1A0A0A6YYK1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-1A0A0A6YYK1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
TRAV8-1A0A0A6YYK1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV8-1A0A0A6YYK1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-1A0A0A6YYK1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-1A0A0A6YYK1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-1A0A0A6YYK1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-1A0A0A6YYK1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-1A0A0A6YYK1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
TRAV8-1A0A0A6YYK1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-1A0A0A6YYK1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-1A0A0A6YYK1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-1A0A0A6YYK1 AC010501.1-201ENST00000606270 1962 ntBASIC18.46■□□□□ 0.55
TRAV8-1A0A0A6YYK1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV8-1A0A0A6YYK1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-1A0A0A6YYK1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-1A0A0A6YYK1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.45■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-1A0A0A6YYK1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 MIR3665-201ENST00000578708 105 ntBASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-1A0A0A6YYK1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV8-1A0A0A6YYK1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-1A0A0A6YYK1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV8-1A0A0A6YYK1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV8-1A0A0A6YYK1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV8-1A0A0A6YYK1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-1A0A0A6YYK1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-1A0A0A6YYK1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-1A0A0A6YYK1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV8-1A0A0A6YYK1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV8-1A0A0A6YYK1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV8-1A0A0A6YYK1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRAV8-1A0A0A6YYK1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
TRAV8-1A0A0A6YYK1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV8-1A0A0A6YYK1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-1A0A0A6YYK1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 AC142381.3-201ENST00000568208 1670 ntBASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV8-1A0A0A6YYK1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms