Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV23-1A0A0A0MS06 WHAMMP3-201ENST00000611636 1609 ntBASIC20.55■□□□□ 0.88
TRBV23-1A0A0A0MS06 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRBV23-1A0A0A0MS06 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV23-1A0A0A0MS06 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
TRBV23-1A0A0A0MS06 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV23-1A0A0A0MS06 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV23-1A0A0A0MS06 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV23-1A0A0A0MS06 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRBV23-1A0A0A0MS06 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV23-1A0A0A0MS06 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV23-1A0A0A0MS06 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.52■□□□□ 0.88
TRBV23-1A0A0A0MS06 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV23-1A0A0A0MS06 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.52■□□□□ 0.88
TRBV23-1A0A0A0MS06 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRBV23-1A0A0A0MS06 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 AL359258.2-201ENST00000564063 1566 ntBASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.51■□□□□ 0.87
TRBV23-1A0A0A0MS06 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV23-1A0A0A0MS06 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV23-1A0A0A0MS06 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.48■□□□□ 0.87
TRBV23-1A0A0A0MS06 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV23-1A0A0A0MS06 AC060814.1-201ENST00000554326 538 ntBASIC20.48■□□□□ 0.87
TRBV23-1A0A0A0MS06 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV23-1A0A0A0MS06 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV23-1A0A0A0MS06 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRBV23-1A0A0A0MS06 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV23-1A0A0A0MS06 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV23-1A0A0A0MS06 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.47■□□□□ 0.87
TRBV23-1A0A0A0MS06 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.47■□□□□ 0.87
TRBV23-1A0A0A0MS06 AC022413.1-201ENST00000624602 984 ntBASIC20.47■□□□□ 0.87
TRBV23-1A0A0A0MS06 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
TRBV23-1A0A0A0MS06 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV23-1A0A0A0MS06 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV23-1A0A0A0MS06 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV23-1A0A0A0MS06 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.46■□□□□ 0.87
TRBV23-1A0A0A0MS06 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.46■□□□□ 0.87
TRBV23-1A0A0A0MS06 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV23-1A0A0A0MS06 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRBV23-1A0A0A0MS06 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV23-1A0A0A0MS06 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV23-1A0A0A0MS06 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TRBV23-1A0A0A0MS06 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRBV23-1A0A0A0MS06 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV23-1A0A0A0MS06 GPX1-201ENST00000419349 1106 ntBASIC20.44■□□□□ 0.86
TRBV23-1A0A0A0MS06 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.44■□□□□ 0.86
TRBV23-1A0A0A0MS06 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 AL449106.1-201ENST00000608517 1980 ntBASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRBV23-1A0A0A0MS06 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV23-1A0A0A0MS06 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRBV23-1A0A0A0MS06 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV23-1A0A0A0MS06 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.41■□□□□ 0.86
TRBV23-1A0A0A0MS06 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV23-1A0A0A0MS06 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV23-1A0A0A0MS06 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRBV23-1A0A0A0MS06 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV23-1A0A0A0MS06 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.4■□□□□ 0.86
TRBV23-1A0A0A0MS06 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.4■□□□□ 0.86
TRBV23-1A0A0A0MS06 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRBV23-1A0A0A0MS06 AC092296.2-201ENST00000589470 999 ntBASIC20.4■□□□□ 0.86
TRBV23-1A0A0A0MS06 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV23-1A0A0A0MS06 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TRBV23-1A0A0A0MS06 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV23-1A0A0A0MS06 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV23-1A0A0A0MS06 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV23-1A0A0A0MS06 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV23-1A0A0A0MS06 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV23-1A0A0A0MS06 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms