Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 ERN1-208ENST00000606895 2068 ntBASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV9-2A0A087WT02 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 AC108673.1-201ENST00000510422 1159 ntBASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV9-2A0A087WT02 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV9-2A0A087WT02 AC068473.5-201ENST00000616428 2072 ntBASIC18.02■□□□□ 0.47
TRAV9-2A0A087WT02 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TRAV9-2A0A087WT02 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV9-2A0A087WT02 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV9-2A0A087WT02 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-2A0A087WT02 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV9-2A0A087WT02 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV9-2A0A087WT02 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
TRAV9-2A0A087WT02 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRAV9-2A0A087WT02 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV9-2A0A087WT02 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV9-2A0A087WT02 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV9-2A0A087WT02 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-2A0A087WT02 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV9-2A0A087WT02 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-2A0A087WT02 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-2A0A087WT02 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-2A0A087WT02 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-2A0A087WT02 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV9-2A0A087WT02 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-2A0A087WT02 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV9-2A0A087WT02 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-2A0A087WT02 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-2A0A087WT02 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAV9-2A0A087WT02 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV9-2A0A087WT02 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-2A0A087WT02 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV9-2A0A087WT02 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV9-2A0A087WT02 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV9-2A0A087WT02 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms