Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 AL357033.4-201ENST00000617703 1807 ntBASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 KRT18P48-201ENST00000434763 852 ntBASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 KRT126P-201ENST00000549467 1181 ntBASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 AC069148.1-201ENST00000608741 768 ntBASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 AC079602.3-201ENST00000623931 403 ntBASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX49Q9Y6V7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 KRT8P32-201ENST00000512863 1461 ntBASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX49Q9Y6V7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 AD000864.1-201ENST00000624076 2295 ntBASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.39■■□□□ 1.02
DDX49Q9Y6V7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX49Q9Y6V7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms