Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AL157888.1-201ENST00000631930 593 ntBASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 AC009102.3-201ENST00000623118 1491 ntBASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA4Q9Y5G9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 EMBP1-201ENST00000458200 901 ntBASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 AL732292.2-201ENST00000609649 430 ntBASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 GPALPP1-207ENST00000611650 899 ntBASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 AL031008.1-201ENST00000619963 541 ntBASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 KRT18P1-202ENST00000452408 1331 ntBASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA4Q9Y5G9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 AL022342.1-201ENST00000400363 863 ntBASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 TSPY19P-201ENST00000418461 509 ntBASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 TSPY18P-201ENST00000441642 509 ntBASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 AC023511.2-201ENST00000618803 211 ntBASIC17.61■□□□□ 0.41
PCDHGA4Q9Y5G9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms