Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 MTCL1P1-201ENST00000446207 792 ntBASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 AC116407.3-201ENST00000623905 1129 ntBASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA9Q9Y5G4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA9Q9Y5G4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 FAM220CP-201ENST00000395253 831 ntBASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 AC145285.3-201ENST00000564603 959 ntBASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA9Q9Y5G4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 AP005117.1-201ENST00000584346 1413 ntBASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA9Q9Y5G4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms