Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 AC141586.5-201ENST00000624546 2050 ntBASIC20.92■□□□□ 0.94
KIF3AQ9Y496 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KIF3AQ9Y496 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KIF3AQ9Y496 PCDHA12-202ENST00000613593 2588 ntBASIC20.92■□□□□ 0.94
KIF3AQ9Y496 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 KRT18P65-201ENST00000439811 1286 ntBASIC20.91■□□□□ 0.94
KIF3AQ9Y496 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KIF3AQ9Y496 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 RASA4DP-201ENST00000460726 1199 ntBASIC20.9■□□□□ 0.94
KIF3AQ9Y496 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 COX11P1-201ENST00000489116 835 ntBASIC20.9■□□□□ 0.94
KIF3AQ9Y496 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 SIRPAP1-201ENST00000448467 1770 ntBASIC20.9■□□□□ 0.94
KIF3AQ9Y496 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.9■□□□□ 0.94
KIF3AQ9Y496 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KIF3AQ9Y496 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KIF3AQ9Y496 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.89■□□□□ 0.94
KIF3AQ9Y496 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.89■□□□□ 0.94
KIF3AQ9Y496 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.89■□□□□ 0.94
KIF3AQ9Y496 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KIF3AQ9Y496 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 AL136038.4-201ENST00000603606 1261 ntBASIC20.89■□□□□ 0.93
KIF3AQ9Y496 AL023973.1-201ENST00000624619 620 ntBASIC20.89■□□□□ 0.93
KIF3AQ9Y496 AC066615.1-201ENST00000640911 628 ntBASIC20.89■□□□□ 0.93
KIF3AQ9Y496 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KIF3AQ9Y496 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 AC100803.2-201ENST00000562459 1963 ntBASIC20.88■□□□□ 0.93
KIF3AQ9Y496 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KIF3AQ9Y496 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms