Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LINC00167-201ENST00000530583 1419 ntBASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 LINC00304-203ENST00000565008 1864 ntBASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 TSPY7P-201ENST00000431358 1114 ntBASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MRPS28Q9Y2Q9 HLA-J-201ENST00000462773 1622 ntBASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 MIR718-201ENST00000390190 70 ntBASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 AC009947.2-201ENST00000444014 672 ntBASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MRPS28Q9Y2Q9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms