Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC26.28■■□□□ 1.8
SHANK2Q9UPX8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SHANK2Q9UPX8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
SHANK2Q9UPX8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SHANK2Q9UPX8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 CRYGEP-201ENST00000412192 528 ntBASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 PDPK2P-202ENST00000562415 1191 ntBASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 AL513190.1-201ENST00000621254 727 ntBASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHANK2Q9UPX8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 LINC00982-205ENST00000420957 435 ntBASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 AC092865.6-201ENST00000642101 219 ntBASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 HLA-DQB1-201ENST00000374943 1656 ntBASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHANK2Q9UPX8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 REXO1L9P-201ENST00000604264 2108 ntBASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 ATP6V0CP3-201ENST00000417255 467 ntBASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHANK2Q9UPX8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 MNT-208ENST00000575394 606 ntTSL 4 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 AP000997.3-201ENST00000623333 2250 ntBASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
SHANK2Q9UPX8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AC211486.1-202ENST00000416371 468 ntBASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.23■■□□□ 1.79
SHANK2Q9UPX8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms