Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 AL355472.2-201ENST00000422958 438 ntBASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 AC096631.2-201ENST00000436136 790 ntBASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 KRT18P16-201ENST00000510337 1294 ntBASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCX3AQ9NNX9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 AC073210.2-201ENST00000430369 194 ntBASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 AC123595.1-201ENST00000440769 1046 ntBASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 AC069236.1-201ENST00000604339 616 ntBASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 KRT8P32-201ENST00000512863 1461 ntBASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.66■□□□□ 0.26
VCX3AQ9NNX9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 KRT18P55-202ENST00000578578 1546 ntBASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 AC104640.1-201ENST00000562617 2109 ntBASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 AL121906.2-201ENST00000621597 723 ntBASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 AC008694.1-202ENST00000636953 945 ntBASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCX3AQ9NNX9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms