Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 IGHV3-47-201ENST00000425060 335 ntBASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 AC099336.1-202ENST00000602961 463 ntBASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRRC4Q9HBW1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PRELID1P1-202ENST00000567272 903 ntBASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 AC125634.1-201ENST00000438758 1403 ntBASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC4Q9HBW1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 CLEC4GP1-201ENST00000596555 870 ntBASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 AL138831.2-201ENST00000606564 490 ntBASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC4Q9HBW1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC4Q9HBW1 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms