Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AC138028.4-201ENST00000564984 1845 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 HBZP1-201ENST00000354915 429 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 AC112907.2-201ENST00000448639 330 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 KRT18P38-201ENST00000449496 1282 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 AL671277.2-201ENST00000458060 996 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 AL359075.1-203ENST00000462729 1002 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 NTF6B-201ENST00000591913 560 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 AL391807.1-203ENST00000604392 2365 ntBASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.37■□□□□ 0.37
CLK4Q9HAZ1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 AL136038.3-201ENST00000561909 1096 ntBASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.36■□□□□ 0.37
CLK4Q9HAZ1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 ZNF444P1-201ENST00000559497 298 ntBASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 LINC01311-201ENST00000565162 1445 ntBASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.35■□□□□ 0.37
CLK4Q9HAZ1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLK4Q9HAZ1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLK4Q9HAZ1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLK4Q9HAZ1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLK4Q9HAZ1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLK4Q9HAZ1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLK4Q9HAZ1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms