Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NDUFAF3Q9BU61 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 PP12613-201ENST00000424958 2230 ntBASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NDUFAF3Q9BU61 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 AC211429.1-201ENST00000415277 523 ntBASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 FAM197Y1-201ENST00000421178 764 ntBASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 ECEL1P3-201ENST00000427961 737 ntBASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 AP003071.4-201ENST00000562276 1284 ntBASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 OR6D1P-203ENST00000641209 4860 ntBASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
NDUFAF3Q9BU61 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms