Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 AC104819.1-201ENST00000504587 486 ntBASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 AP005901.3-202ENST00000581653 237 ntBASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 AC005336.2-201ENST00000593183 939 ntBASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 AC097374.2-201ENST00000618617 1306 ntBASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 AC096633.1-201ENST00000422446 749 ntBASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 MINOS1P3-201ENST00000457048 203 ntBASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 KRT18P56-201ENST00000507275 550 ntBASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 AC074051.2-201ENST00000565115 352 ntBASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 AC125634.1-201ENST00000438758 1403 ntBASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.53■□□□□ 0.4
CCM2Q9BSQ5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 LTB4R2-202ENST00000528054 3092 ntBASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 AC009949.1-201ENST00000623048 1830 ntBASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 DDX43P3-201ENST00000441064 443 ntBASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 AL138831.2-201ENST00000606564 490 ntBASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCM2Q9BSQ5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.52■□□□□ 0.39
CCM2Q9BSQ5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCM2Q9BSQ5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCM2Q9BSQ5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 IGHV3-47-201ENST00000425060 335 ntBASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms