Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 TPM4P1-201ENST00000436100 807 ntBASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 MIR5100-201ENST00000579544 119 ntBASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.38■□□□□ 0.53
PRICKLE1Q96MT3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 INTS4P1-201ENST00000438455 1935 ntBASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 AC004870.1-201ENST00000315132 882 ntBASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 AC007967.3-201ENST00000434308 558 ntBASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 AL591684.3-201ENST00000605187 298 ntBASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 AC022898.2-201ENST00000616822 1312 ntBASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 AC010460.3-201ENST00000511359 1579 ntBASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE1Q96MT3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 AL354751.1-201ENST00000412768 1863 ntBASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms