Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 AC025062.2-201ENST00000605477 670 ntBASIC20.82■□□□□ 0.92
TRIM47Q96LD4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.82■□□□□ 0.92
TRIM47Q96LD4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 AC090340.1-201ENST00000620778 4980 ntBASIC20.82■□□□□ 0.92
TRIM47Q96LD4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 HEIH-201ENST00000623091 1652 ntBASIC20.81■□□□□ 0.92
TRIM47Q96LD4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 ABCD1P5-201ENST00000445663 754 ntBASIC20.81■□□□□ 0.92
TRIM47Q96LD4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 AC011467.2-201ENST00000598425 242 ntBASIC20.81■□□□□ 0.92
TRIM47Q96LD4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 AL138831.2-201ENST00000606564 490 ntBASIC20.81■□□□□ 0.92
TRIM47Q96LD4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM47Q96LD4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 AC008735.5-201ENST00000623544 497 ntBASIC20.8■□□□□ 0.92
TRIM47Q96LD4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM47Q96LD4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 AL356309.3-201ENST00000624132 1934 ntBASIC20.79■□□□□ 0.92
TRIM47Q96LD4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 AC135050.7-201ENST00000624508 2218 ntBASIC20.79■□□□□ 0.92
TRIM47Q96LD4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM47Q96LD4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms