Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 ARMC10P1-201ENST00000313754 855 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.31□□□□□ -0.12
RITA1Q96K30 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RITA1Q96K30 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 AL845331.1-201ENST00000424978 1190 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.31□□□□□ -0.12
RITA1Q96K30 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.31□□□□□ -0.12
RITA1Q96K30 KRT8P26-201ENST00000534154 1276 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.31□□□□□ -0.12
RITA1Q96K30 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.31□□□□□ -0.12
RITA1Q96K30 IGHV3-41-201ENST00000613121 348 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RITA1Q96K30 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.31□□□□□ -0.12
RITA1Q96K30 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RITA1Q96K30 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
RITA1Q96K30 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 AC016734.2-201ENST00000624325 1377 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 REXO1L11P-201ENST00000620964 1927 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.31□□□□□ -0.12
RITA1Q96K30 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RITA1Q96K30 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 AC106820.2-201ENST00000563775 3264 ntBASIC14.3□□□□□ -0.12
RITA1Q96K30 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.3□□□□□ -0.12
RITA1Q96K30 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 GUSBP12-201ENST00000513727 720 ntBASIC14.3□□□□□ -0.12
RITA1Q96K30 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RITA1Q96K30 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 AL358472.4-201ENST00000633140 710 ntBASIC14.3□□□□□ -0.12
RITA1Q96K30 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RITA1Q96K30 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RITA1Q96K30 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.3□□□□□ -0.12
RITA1Q96K30 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.29□□□□□ -0.12
RITA1Q96K30 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.29□□□□□ -0.12
RITA1Q96K30 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.29□□□□□ -0.12
RITA1Q96K30 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.29□□□□□ -0.12
RITA1Q96K30 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RITA1Q96K30 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RITA1Q96K30 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RITA1Q96K30 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RITA1Q96K30 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.29□□□□□ -0.12
RITA1Q96K30 AC091607.1-201ENST00000490318 1060 ntBASIC14.29□□□□□ -0.12
RITA1Q96K30 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RITA1Q96K30 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RITA1Q96K30 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RITA1Q96K30 AL592071.1-201ENST00000611956 408 ntBASIC14.29□□□□□ -0.12
RITA1Q96K30 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.29□□□□□ -0.12
RITA1Q96K30 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms