Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.05■□□□□ 0
SPG11Q96JI7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.05■□□□□ 0
SPG11Q96JI7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.05■□□□□ 0
SPG11Q96JI7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.05■□□□□ 0
SPG11Q96JI7 AC010654.1-201ENST00000615722 808 ntBASIC15.05■□□□□ 0
SPG11Q96JI7 MIR6752-201ENST00000618442 71 ntBASIC15.05■□□□□ 0
SPG11Q96JI7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SPG11Q96JI7 AC063926.2-201ENST00000623766 1308 ntBASIC15.05■□□□□ 0
SPG11Q96JI7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.05■□□□□ 0
SPG11Q96JI7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.05■□□□□ 0
SPG11Q96JI7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.05■□□□□ -0
SPG11Q96JI7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
SPG11Q96JI7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SPG11Q96JI7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 MRPL20P1-201ENST00000400819 433 ntBASIC15.05■□□□□ -0
SPG11Q96JI7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.05■□□□□ -0
SPG11Q96JI7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.05■□□□□ -0
SPG11Q96JI7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.05■□□□□ -0
SPG11Q96JI7 AC109322.1-201ENST00000524499 1264 ntBASIC15.05■□□□□ -0
SPG11Q96JI7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.05■□□□□ -0
SPG11Q96JI7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.05■□□□□ -0
SPG11Q96JI7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.05■□□□□ -0
SPG11Q96JI7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 ESPNP-201ENST00000270691 2015 ntBASIC15.05■□□□□ -0
SPG11Q96JI7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SPG11Q96JI7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SPG11Q96JI7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SPG11Q96JI7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.04■□□□□ -0
SPG11Q96JI7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.04■□□□□ -0
SPG11Q96JI7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.04■□□□□ -0
SPG11Q96JI7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.04■□□□□ -0
SPG11Q96JI7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.04■□□□□ -0
SPG11Q96JI7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.04■□□□□ -0
SPG11Q96JI7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.04■□□□□ -0
SPG11Q96JI7 AC055876.3-201ENST00000431496 288 ntBASIC15.04■□□□□ -0
SPG11Q96JI7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.04■□□□□ -0
SPG11Q96JI7 RN7SL204P-201ENST00000582831 262 ntBASIC15.04■□□□□ -0
SPG11Q96JI7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 AC138649.4-201ENST00000612222 287 ntBASIC15.04■□□□□ -0
SPG11Q96JI7 AC004877.2-201ENST00000623941 599 ntBASIC15.04■□□□□ -0
SPG11Q96JI7 Z92544.3-201ENST00000624747 417 ntBASIC15.04■□□□□ -0
SPG11Q96JI7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SPG11Q96JI7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPG11Q96JI7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SPG11Q96JI7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.03■□□□□ -0
SPG11Q96JI7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPG11Q96JI7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.03■□□□□ -0
SPG11Q96JI7 AC004461.1-201ENST00000412461 403 ntBASIC15.03■□□□□ -0
SPG11Q96JI7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
SPG11Q96JI7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.03■□□□□ -0
SPG11Q96JI7 AC022145.2-201ENST00000598203 171 ntBASIC15.03■□□□□ -0
SPG11Q96JI7 SIRPAP1-201ENST00000448467 1770 ntBASIC15.03■□□□□ -0
SPG11Q96JI7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.03■□□□□ -0
SPG11Q96JI7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.03■□□□□ -0
SPG11Q96JI7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SPG11Q96JI7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 AC023141.5-201ENST00000458585 616 ntBASIC15.03■□□□□ -0
SPG11Q96JI7 MEIS3P1-201ENST00000495167 958 ntBASIC15.03■□□□□ -0
SPG11Q96JI7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.03■□□□□ -0
SPG11Q96JI7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms