Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ABCD1P5-201ENST00000445663 754 ntBASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 AC138932.1-201ENST00000534164 6830 ntBASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 RBM17P3-201ENST00000417687 1192 ntBASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 AC103564.2-201ENST00000432853 1299 ntBASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 AC106795.1-205ENST00000512851 1056 ntBASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 AF238378.1-201ENST00000526806 358 ntBASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 AP001269.4-201ENST00000609611 512 ntBASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCD1Q96GM5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
SMARCD1Q96GM5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SMARCD1Q96GM5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 AL121912.1-201ENST00000603683 238 ntBASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 AC008608.2-201ENST00000606089 416 ntBASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 AL031008.1-201ENST00000619963 541 ntBASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCD1Q96GM5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCD1Q96GM5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms