Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF34Q969K3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF34Q969K3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF34Q969K3 AC018470.1-201ENST00000624790 3129 ntBASIC18.66■□□□□ 0.58
RNF34Q969K3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF34Q969K3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF34Q969K3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF34Q969K3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF34Q969K3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF34Q969K3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF34Q969K3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF34Q969K3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 TPSP2-201ENST00000561760 610 ntBASIC18.65■□□□□ 0.58
RNF34Q969K3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF34Q969K3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF34Q969K3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF34Q969K3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF34Q969K3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF34Q969K3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
RNF34Q969K3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
RNF34Q969K3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
RNF34Q969K3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF34Q969K3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF34Q969K3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF34Q969K3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF34Q969K3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF34Q969K3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF34Q969K3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF34Q969K3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF34Q969K3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF34Q969K3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF34Q969K3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF34Q969K3 DRAXINP1-201ENST00000437611 948 ntBASIC18.64■□□□□ 0.57
RNF34Q969K3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF34Q969K3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF34Q969K3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF34Q969K3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF34Q969K3 Z69720.1-201ENST00000601483 472 ntBASIC18.64■□□□□ 0.57
RNF34Q969K3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
RNF34Q969K3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.64■□□□□ 0.57
RNF34Q969K3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF34Q969K3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
RNF34Q969K3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF34Q969K3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF34Q969K3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF34Q969K3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF34Q969K3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms