Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC1Q92922 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC1Q92922 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 OR7E47P-204ENST00000575924 449 ntBASIC22.65■■□□□ 1.22
SMARCC1Q92922 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 AC093028.1-201ENST00000622998 982 ntBASIC22.65■■□□□ 1.22
SMARCC1Q92922 AC007064.4-201ENST00000637740 555 ntBASIC22.65■■□□□ 1.22
SMARCC1Q92922 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC1Q92922 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC1Q92922 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC1Q92922 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SMARCC1Q92922 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.64■■□□□ 1.22
SMARCC1Q92922 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.64■■□□□ 1.22
SMARCC1Q92922 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC1Q92922 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.64■■□□□ 1.22
SMARCC1Q92922 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCC1Q92922 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.64■■□□□ 1.21
SMARCC1Q92922 STK19B-204ENST00000512515 211 ntBASIC22.64■■□□□ 1.21
SMARCC1Q92922 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
SMARCC1Q92922 SPCS2P1-201ENST00000561636 679 ntBASIC22.64■■□□□ 1.21
SMARCC1Q92922 AC109462.3-201ENST00000573934 613 ntBASIC22.64■■□□□ 1.21
SMARCC1Q92922 STK25P1-201ENST00000585406 838 ntBASIC22.64■■□□□ 1.21
SMARCC1Q92922 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.64■■□□□ 1.21
SMARCC1Q92922 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 AC025580.3-201ENST00000617932 1424 ntBASIC22.64■■□□□ 1.21
SMARCC1Q92922 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC1Q92922 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCC1Q92922 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SMARCC1Q92922 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 AL139400.1-201ENST00000366220 510 ntBASIC22.63■■□□□ 1.21
SMARCC1Q92922 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.63■■□□□ 1.21
SMARCC1Q92922 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.63■■□□□ 1.21
SMARCC1Q92922 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SMARCC1Q92922 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 AC023141.13-201ENST00000604991 943 ntBASIC22.63■■□□□ 1.21
SMARCC1Q92922 AL353135.1-201ENST00000606729 504 ntBASIC22.63■■□□□ 1.21
SMARCC1Q92922 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
SMARCC1Q92922 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC1Q92922 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCC1Q92922 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCC1Q92922 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 AC004835.2-201ENST00000603762 682 ntBASIC22.62■■□□□ 1.21
SMARCC1Q92922 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCC1Q92922 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SMARCC1Q92922 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCC1Q92922 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCC1Q92922 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 AL513210.1-201ENST00000629608 234 ntBASIC22.61■■□□□ 1.21
SMARCC1Q92922 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 AC097637.2-201ENST00000624096 1997 ntBASIC22.61■■□□□ 1.21
SMARCC1Q92922 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SMARCC1Q92922 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCC1Q92922 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms