Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 AC004835.2-201ENST00000603762 682 ntBASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 LETM1P2-201ENST00000597330 2178 ntBASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SH3TC2Q8TF17 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 AC015922.1-201ENST00000421102 1152 ntBASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 AC008667.4-201ENST00000607370 168 ntBASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 AC010507.1-201ENST00000633895 436 ntBASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3TC2Q8TF17 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 AC109322.1-201ENST00000524499 1264 ntBASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 KRT19P2-202ENST00000557173 1012 ntBASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SH3TC2Q8TF17 KRT8P47-201ENST00000604727 1398 ntBASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 AC004461.1-201ENST00000412461 403 ntBASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 AC073592.5-201ENST00000624854 528 ntBASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 AL513210.1-201ENST00000629608 234 ntBASIC20.08■□□□□ 0.81
SH3TC2Q8TF17 AP000974.1-201ENST00000623909 2387 ntBASIC20.08■□□□□ 0.8
SH3TC2Q8TF17 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3TC2Q8TF17 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH3TC2Q8TF17 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SH3TC2Q8TF17 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3TC2Q8TF17 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SH3TC2Q8TF17 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SH3TC2Q8TF17 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms