Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH19Q8TAB3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PCDH19Q8TAB3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDH19Q8TAB3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH19Q8TAB3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH19Q8TAB3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDH19Q8TAB3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH19Q8TAB3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 AC139713.2-201ENST00000641328 2723 ntBASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 RN7SL606P-201ENST00000472779 293 ntBASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH19Q8TAB3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 KRT18P56-201ENST00000507275 550 ntBASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 AL645608.8-201ENST00000606034 2086 ntBASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH19Q8TAB3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCDH19Q8TAB3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms