Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 OR6D1P-203ENST00000641209 4860 ntBASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AL353708.3-201ENST00000610272 989 ntBASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AC132938.6-201ENST00000623828 1655 ntBASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 KRT16P1-201ENST00000399124 1418 ntBASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RFWD2Q8NHY2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 AC098590.1-201ENST00000468126 897 ntBASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 DUTP2-201ENST00000519164 463 ntBASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 CR392000.1-201ENST00000624770 1228 ntBASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFWD2Q8NHY2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 HLA-J-201ENST00000462773 1622 ntBASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
RFWD2Q8NHY2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms