Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 AL133373.2-201ENST00000623187 2828 ntBASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 LINC00265-3P-201ENST00000447588 903 ntBASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 AC233702.3-201ENST00000578656 1387 ntBASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC148Q8NFR7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 DDX43P3-201ENST00000441064 443 ntBASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 AC092119.3-201ENST00000612618 583 ntBASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC148Q8NFR7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 AC005336.2-201ENST00000593183 939 ntBASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 AC092329.2-201ENST00000598402 547 ntBASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC148Q8NFR7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC148Q8NFR7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms