Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 REXO1L11P-201ENST00000620964 1927 ntBASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AL591684.3-201ENST00000605187 298 ntBASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 BX276092.7-203ENST00000637198 1536 ntBASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 AC122714.2-201ENST00000502787 707 ntBASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 IFNL4P1-201ENST00000607083 540 ntBASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 AC067852.2-201ENST00000590513 2313 ntBASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC01555Q8NAE3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 AC134043.2-201ENST00000624206 2238 ntBASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01555Q8NAE3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 AKR1C7P-201ENST00000305623 895 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms