Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC006116.8-202ENST00000587620 1550 ntBASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 BX276092.7-203ENST00000637198 1536 ntBASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 COX5BP2-201ENST00000392354 334 ntBASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AC111152.3-201ENST00000569699 673 ntBASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.42■□□□□ 0.22
C9orf40Q8IXQ3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 AC122714.2-201ENST00000502787 707 ntBASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf40Q8IXQ3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms