Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 AL023806.1-201ENST00000603994 1649 ntBASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 AC005521.1-201ENST00000393351 872 ntBASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 STARP1-201ENST00000397973 869 ntBASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 KRT18P38-201ENST00000449496 1282 ntBASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC83Q8IWF9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 BX664615.1-201ENST00000443558 458 ntBASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 AL138688.1-201ENST00000624851 1594 ntBASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 HLA-J-201ENST00000462773 1622 ntBASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC83Q8IWF9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 AC116407.2-201ENST00000613639 860 ntBASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms