Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 MRPL20P1-201ENST00000400819 433 ntBASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 PMS2P4-201ENST00000412466 1052 ntBASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 AC091812.2-201ENST00000619081 385 ntBASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13BQ7Z7G8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 GPR89P-201ENST00000407924 1495 ntBASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 TBC1D3P5-201ENST00000579401 1545 ntBASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 ADH5P3-201ENST00000433842 1137 ntBASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13BQ7Z7G8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 AF228730.6-201ENST00000641497 218 ntBASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 AC084121.3-201ENST00000641716 218 ntBASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 AC105233.6-201ENST00000642093 218 ntBASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 BCAR1-209ENST00000546196 1340 ntBASIC10.9□□□□□ -0.66
VPS13BQ7Z7G8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 DUT-210ENST00000559935 569 ntTSL 3 BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC10.9□□□□□ -0.67
VPS13BQ7Z7G8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms