Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 MMP23A-201ENST00000234610 1017 ntBASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 AC009947.2-201ENST00000444014 672 ntBASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 AL024508.2-201ENST00000607749 1894 ntBASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 HMGA1P5-201ENST00000412453 271 ntBASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 NEK4P2-201ENST00000580004 1012 ntBASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 AC024243.1-201ENST00000609234 778 ntBASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 KRT18P55-202ENST00000578578 1546 ntBASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
MRPL55Q7Z7F7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 LINC00896-202ENST00000609602 2128 ntBASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms