Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 AC005332.3-201ENST00000589904 676 ntBASIC20.1■□□□□ 0.81
SHC4Q6S5L8 AL390719.2-201ENST00000606993 987 ntBASIC20.1■□□□□ 0.81
SHC4Q6S5L8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHC4Q6S5L8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.08■□□□□ 0.81
SHC4Q6S5L8 AC083849.1-201ENST00000615227 514 ntBASIC20.08■□□□□ 0.81
SHC4Q6S5L8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 LINC01311-201ENST00000565162 1445 ntBASIC20.08■□□□□ 0.8
SHC4Q6S5L8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC4Q6S5L8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 LINC01023-201ENST00000606054 436 ntBASIC20.07■□□□□ 0.8
SHC4Q6S5L8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC4Q6S5L8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHC4Q6S5L8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHC4Q6S5L8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.06■□□□□ 0.8
SHC4Q6S5L8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC4Q6S5L8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms