Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AC105036.2-201ENST00000569468 176 ntBASIC16.82■□□□□ 0.28
LPCAT4Q643R3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.82■□□□□ 0.28
LPCAT4Q643R3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AL356309.3-201ENST00000624132 1934 ntBASIC16.82■□□□□ 0.28
LPCAT4Q643R3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AC092171.3-201ENST00000610122 2651 ntBASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 AL662844.4-201ENST00000606367 2838 ntBASIC16.81■□□□□ 0.28
LPCAT4Q643R3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LPCAT4Q643R3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 PAUPAR-201ENST00000630360 2965 ntBASIC16.8■□□□□ 0.28
LPCAT4Q643R3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LPCAT4Q643R3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.79■□□□□ 0.28
LPCAT4Q643R3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms