Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF17Q5VTA0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 MTDHP3-201ENST00000594186 672 ntBASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 KRT8P47-201ENST00000604727 1398 ntBASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF17Q5VTA0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AC009113.1-201ENST00000570267 2443 ntBASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 PKD1P1-201ENST00000458669 6805 ntBASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF17Q5VTA0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PRAMEF17Q5VTA0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.96■□□□□ 0.3
PRAMEF17Q5VTA0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms