Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 AC093028.1-201ENST00000622998 982 ntBASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 AC087163.2-201ENST00000457299 853 ntBASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC26.72■■□□□ 1.87
CDC42BPAQ5VT25 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 LINC00982-205ENST00000420957 435 ntBASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CDC42BPAQ5VT25 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC26.7■■□□□ 1.87
CDC42BPAQ5VT25 AC096734.2-201ENST00000562054 433 ntBASIC26.7■■□□□ 1.87
CDC42BPAQ5VT25 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC26.7■■□□□ 1.87
CDC42BPAQ5VT25 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CDC42BPAQ5VT25 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
CDC42BPAQ5VT25 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42BPAQ5VT25 EFTUD1P1-204ENST00000560401 1798 ntBASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 CALY-203ENST00000368558 825 ntTSL 5 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 AC022145.2-201ENST00000598203 171 ntBASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CDC42BPAQ5VT25 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 MIR3197-201ENST00000582241 73 ntBASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 AC092919.2-201ENST00000623631 1645 ntBASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 SMN2-210ENST00000511812 867 ntTSL 2 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 AL513210.1-201ENST00000629608 234 ntBASIC26.68■■□□□ 1.86
CDC42BPAQ5VT25 WIZP1-201ENST00000531444 2299 ntBASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 AC099522.2-201ENST00000607001 744 ntBASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 AC106028.4-201ENST00000614509 607 ntBASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPAQ5VT25 AC135776.1-201ENST00000319817 2481 ntBASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 IGHV3-52-201ENST00000519770 353 ntBASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.66■■□□□ 1.86
CDC42BPAQ5VT25 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms