Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 RPS15P9-201ENST00000494093 319 ntBASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 MIR661-201ENST00000384842 89 ntBASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13DQ5THJ4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 ACTL9-202ENST00000612068 1252 ntBASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 AC009949.1-201ENST00000623048 1830 ntBASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 AJ011932.1-201ENST00000621707 465 ntBASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 AC092919.2-201ENST00000623631 1645 ntBASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13DQ5THJ4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13DQ5THJ4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13DQ5THJ4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VPS13DQ5THJ4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC11.85□□□□□ -0.51
VPS13DQ5THJ4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms