Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 ECEL1P3-201ENST00000427961 737 ntBASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 AC106820.2-201ENST00000563775 3264 ntBASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIF1Q5T3J3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 AC011676.5-201ENST00000624864 2660 ntBASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 OR6D1P-202ENST00000641007 5290 ntBASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 ECEL1P2-202ENST00000465689 757 ntBASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 AC024563.2-201ENST00000603282 481 ntBASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRIF1Q5T3J3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 TSPY15P-201ENST00000457163 923 ntBASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 AC124067.4-201ENST00000519691 2379 ntBASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRIF1Q5T3J3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms