Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC073592.5-201ENST00000624854 528 ntBASIC18.82■□□□□ 0.6
VARS2Q5ST30 AL022326.1-202ENST00000641533 845 ntBASIC18.82■□□□□ 0.6
VARS2Q5ST30 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.82■□□□□ 0.6
VARS2Q5ST30 AC004817.3-201ENST00000602957 2129 ntBASIC18.82■□□□□ 0.6
VARS2Q5ST30 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
VARS2Q5ST30 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VARS2Q5ST30 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 KRT18P58-201ENST00000527480 1120 ntBASIC18.81■□□□□ 0.6
VARS2Q5ST30 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
VARS2Q5ST30 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARS2Q5ST30 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 SPDYE21P-201ENST00000413323 827 ntBASIC18.8■□□□□ 0.6
VARS2Q5ST30 AC098831.1-202ENST00000438821 336 ntBASIC18.8■□□□□ 0.6
VARS2Q5ST30 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 AC116407.2-201ENST00000613639 860 ntBASIC18.8■□□□□ 0.6
VARS2Q5ST30 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VARS2Q5ST30 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 SIGLEC16-201ENST00000599858 1437 ntBASIC18.8■□□□□ 0.6
VARS2Q5ST30 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 AL049757.1-201ENST00000616842 1596 ntBASIC18.8■□□□□ 0.6
VARS2Q5ST30 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VARS2Q5ST30 ZNF259P1-201ENST00000407656 1365 ntBASIC18.8■□□□□ 0.6
VARS2Q5ST30 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 AC009949.1-201ENST00000623048 1830 ntBASIC18.79■□□□□ 0.6
VARS2Q5ST30 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 AL353593.2-201ENST00000602529 1483 ntBASIC18.79■□□□□ 0.6
VARS2Q5ST30 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 AP000997.3-201ENST00000623333 2250 ntBASIC18.79■□□□□ 0.6
VARS2Q5ST30 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 LAGE3P1-201ENST00000425356 484 ntBASIC18.79■□□□□ 0.6
VARS2Q5ST30 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 AC105339.3-201ENST00000560043 636 ntBASIC18.79■□□□□ 0.6
VARS2Q5ST30 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 RN7SL275P-201ENST00000582762 335 ntBASIC18.79■□□□□ 0.6
VARS2Q5ST30 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARS2Q5ST30 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VARS2Q5ST30 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms