Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.21■□□□□ 0.34
PCDH1Q08174 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH1Q08174 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PCDH1Q08174 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH1Q08174 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH1Q08174 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH1Q08174 AC009949.1-201ENST00000623048 1830 ntBASIC17.2■□□□□ 0.34
PCDH1Q08174 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDH1Q08174 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH1Q08174 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH1Q08174 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH1Q08174 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH1Q08174 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH1Q08174 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH1Q08174 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 Z83836.1-201ENST00000624605 1642 ntBASIC17.2■□□□□ 0.34
PCDH1Q08174 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH1Q08174 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH1Q08174 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH1Q08174 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH1Q08174 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH1Q08174 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH1Q08174 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH1Q08174 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH1Q08174 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH1Q08174 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDH1Q08174 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH1Q08174 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH1Q08174 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH1Q08174 AC005104.2-201ENST00000427818 678 ntBASIC17.19■□□□□ 0.34
PCDH1Q08174 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH1Q08174 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 RN7SL606P-201ENST00000472779 293 ntBASIC17.19■□□□□ 0.34
PCDH1Q08174 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDH1Q08174 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDH1Q08174 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH1Q08174 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 AL138688.1-201ENST00000624851 1594 ntBASIC17.19■□□□□ 0.34
PCDH1Q08174 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH1Q08174 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH1Q08174 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDH1Q08174 HLA-J-201ENST00000462773 1622 ntBASIC17.18■□□□□ 0.34
PCDH1Q08174 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDH1Q08174 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDH1Q08174 REXO1L11P-201ENST00000620964 1927 ntBASIC17.18■□□□□ 0.34
PCDH1Q08174 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 AL645929.1-201ENST00000420084 975 ntBASIC17.18■□□□□ 0.34
PCDH1Q08174 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH1Q08174 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH1Q08174 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH1Q08174 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH1Q08174 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH1Q08174 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH1Q08174 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PCDH1Q08174 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDH1Q08174 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH1Q08174 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH1Q08174 AL355312.1-201ENST00000407115 2176 ntBASIC17.17■□□□□ 0.34
PCDH1Q08174 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms