Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKL1Q00532 AD000864.1-201ENST00000624076 2295 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL1Q00532 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 HBZP1-201ENST00000354915 429 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 MIR662-201ENST00000384847 95 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL1Q00532 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKL1Q00532 KRT18P38-201ENST00000449496 1282 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 AC092597.1-201ENST00000487352 616 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKL1Q00532 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKL1Q00532 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL1Q00532 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKL1Q00532 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDKL1Q00532 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL1Q00532 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 PP12613-201ENST00000424958 2230 ntBASIC17.55■□□□□ 0.4
CDKL1Q00532 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL1Q00532 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL1Q00532 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.54■□□□□ 0.4
CDKL1Q00532 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.54■□□□□ 0.4
CDKL1Q00532 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL1Q00532 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDKL1Q00532 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL1Q00532 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDKL1Q00532 AC022211.2-201ENST00000585075 2527 ntBASIC17.53■□□□□ 0.4
CDKL1Q00532 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL1Q00532 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms