Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABREP78334 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABREP78334 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABREP78334 AC002310.6-201ENST00000624451 1377 ntBASIC16.89■□□□□ 0.3
GABREP78334 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GABREP78334 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
GABREP78334 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.89■□□□□ 0.29
GABREP78334 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.89■□□□□ 0.29
GABREP78334 CYMP-203ENST00000474680 1263 ntBASIC16.89■□□□□ 0.29
GABREP78334 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.89■□□□□ 0.29
GABREP78334 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.89■□□□□ 0.29
GABREP78334 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 MIR4469-201ENST00000583919 79 ntBASIC16.89■□□□□ 0.29
GABREP78334 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.89■□□□□ 0.29
GABREP78334 AC073592.4-201ENST00000623827 446 ntBASIC16.89■□□□□ 0.29
GABREP78334 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GABREP78334 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABREP78334 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABREP78334 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GABREP78334 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.89■□□□□ 0.29
GABREP78334 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABREP78334 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABREP78334 AL020996.1-203ENST00000536896 2307 ntBASIC16.88■□□□□ 0.29
GABREP78334 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.88■□□□□ 0.29
GABREP78334 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GABREP78334 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.88■□□□□ 0.29
GABREP78334 ALG1L5P-201ENST00000482043 771 ntBASIC16.88■□□□□ 0.29
GABREP78334 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.88■□□□□ 0.29
GABREP78334 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.88■□□□□ 0.29
GABREP78334 RFPL4AP1-201ENST00000530883 850 ntBASIC16.88■□□□□ 0.29
GABREP78334 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.88■□□□□ 0.29
GABREP78334 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
GABREP78334 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GABREP78334 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABREP78334 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
GABREP78334 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 AC020763.4-201ENST00000623414 4170 ntBASIC16.87■□□□□ 0.29
GABREP78334 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GABREP78334 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 CRYGEP-201ENST00000412192 528 ntBASIC16.87■□□□□ 0.29
GABREP78334 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.87■□□□□ 0.29
GABREP78334 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.87■□□□□ 0.29
GABREP78334 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.87■□□□□ 0.29
GABREP78334 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.87■□□□□ 0.29
GABREP78334 YBX1P5-201ENST00000509441 847 ntBASIC16.87■□□□□ 0.29
GABREP78334 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.87■□□□□ 0.29
GABREP78334 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.87■□□□□ 0.29
GABREP78334 MIR3197-201ENST00000582241 73 ntBASIC16.87■□□□□ 0.29
GABREP78334 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.87■□□□□ 0.29
GABREP78334 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.87■□□□□ 0.29
GABREP78334 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GABREP78334 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
GABREP78334 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GABREP78334 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms