Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.38■□□□□ 0.37
YBX1P67809 BX276092.5-203ENST00000456199 560 ntBASIC17.38■□□□□ 0.37
YBX1P67809 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.38■□□□□ 0.37
YBX1P67809 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.38■□□□□ 0.37
YBX1P67809 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.38■□□□□ 0.37
YBX1P67809 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.38■□□□□ 0.37
YBX1P67809 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.38■□□□□ 0.37
YBX1P67809 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
YBX1P67809 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.38■□□□□ 0.37
YBX1P67809 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 AL845331.1-201ENST00000424978 1190 ntBASIC17.37■□□□□ 0.37
YBX1P67809 TSSC2-201ENST00000450217 709 ntBASIC17.37■□□□□ 0.37
YBX1P67809 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 RN7SL606P-201ENST00000472779 293 ntBASIC17.37■□□□□ 0.37
YBX1P67809 AC091607.1-201ENST00000490318 1060 ntBASIC17.37■□□□□ 0.37
YBX1P67809 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.37■□□□□ 0.37
YBX1P67809 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.37■□□□□ 0.37
YBX1P67809 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 NPAP1P7-201ENST00000613027 823 ntBASIC17.37■□□□□ 0.37
YBX1P67809 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
YBX1P67809 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YBX1P67809 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.37■□□□□ 0.37
YBX1P67809 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.36■□□□□ 0.37
YBX1P67809 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 TSPY12P-201ENST00000421279 868 ntBASIC17.36■□□□□ 0.37
YBX1P67809 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.36■□□□□ 0.37
YBX1P67809 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.36■□□□□ 0.37
YBX1P67809 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.36■□□□□ 0.37
YBX1P67809 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
YBX1P67809 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.36■□□□□ 0.37
YBX1P67809 MIR3180-1-201ENST00000580374 94 ntBASIC17.36■□□□□ 0.37
YBX1P67809 MIR3180-3-201ENST00000584616 94 ntBASIC17.36■□□□□ 0.37
YBX1P67809 AL121672.3-201ENST00000608644 468 ntBASIC17.36■□□□□ 0.37
YBX1P67809 AC124864.1-201ENST00000623408 392 ntBASIC17.36■□□□□ 0.37
YBX1P67809 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
YBX1P67809 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
YBX1P67809 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
YBX1P67809 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
YBX1P67809 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.36■□□□□ 0.37
YBX1P67809 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YBX1P67809 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.36■□□□□ 0.37
YBX1P67809 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.35■□□□□ 0.37
YBX1P67809 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.35■□□□□ 0.37
YBX1P67809 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YBX1P67809 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
YBX1P67809 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms