Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN20P56880 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN20P56880 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN20P56880 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN20P56880 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN20P56880 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.35■□□□□ 0.21
CLDN20P56880 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN20P56880 AL645608.8-201ENST00000606034 2086 ntBASIC16.35■□□□□ 0.21
CLDN20P56880 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.35■□□□□ 0.21
CLDN20P56880 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.35■□□□□ 0.21
CLDN20P56880 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN20P56880 AC008687.5-201ENST00000593746 558 ntBASIC16.35■□□□□ 0.21
CLDN20P56880 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.35■□□□□ 0.21
CLDN20P56880 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN20P56880 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN20P56880 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLDN20P56880 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN20P56880 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN20P56880 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN20P56880 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
CLDN20P56880 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN20P56880 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CLDN20P56880 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDN20P56880 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN20P56880 NPAP1P7-201ENST00000613027 823 ntBASIC16.34■□□□□ 0.21
CLDN20P56880 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN20P56880 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN20P56880 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN20P56880 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN20P56880 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN20P56880 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN20P56880 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CLDN20P56880 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLDN20P56880 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN20P56880 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.33■□□□□ 0.21
CLDN20P56880 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN20P56880 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN20P56880 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN20P56880 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN20P56880 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN20P56880 CHCHD2P8-201ENST00000429873 447 ntBASIC16.33■□□□□ 0.2
CLDN20P56880 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 AP002383.4-201ENST00000442518 975 ntBASIC16.33■□□□□ 0.2
CLDN20P56880 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDN20P56880 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN20P56880 AC113404.2-201ENST00000507884 177 ntBASIC16.33■□□□□ 0.2
CLDN20P56880 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN20P56880 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN20P56880 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
CLDN20P56880 AC092119.3-201ENST00000612618 583 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms