Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
EPHA4P54764 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA4P54764 PMPCAP1-201ENST00000508114 1576 ntBASIC17.12■□□□□ 0.33
EPHA4P54764 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
EPHA4P54764 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
EPHA4P54764 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA4P54764 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA4P54764 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.12■□□□□ 0.33
EPHA4P54764 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 AC139887.3-201ENST00000568585 713 ntBASIC17.12■□□□□ 0.33
EPHA4P54764 MIR7706-201ENST00000613747 67 ntBASIC17.12■□□□□ 0.33
EPHA4P54764 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
EPHA4P54764 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.12■□□□□ 0.33
EPHA4P54764 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 IL9RP2-201ENST00000423948 1312 ntBASIC17.12■□□□□ 0.33
EPHA4P54764 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA4P54764 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.12■□□□□ 0.33
EPHA4P54764 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA4P54764 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EPHA4P54764 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.12■□□□□ 0.33
EPHA4P54764 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.12■□□□□ 0.33
EPHA4P54764 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EPHA4P54764 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EPHA4P54764 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.11■□□□□ 0.33
EPHA4P54764 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.11■□□□□ 0.33
EPHA4P54764 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.11■□□□□ 0.33
EPHA4P54764 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EPHA4P54764 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
EPHA4P54764 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.11■□□□□ 0.33
EPHA4P54764 AC073592.4-201ENST00000623827 446 ntBASIC17.11■□□□□ 0.33
EPHA4P54764 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EPHA4P54764 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
EPHA4P54764 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA4P54764 AC079776.2-201ENST00000641154 1609 ntBASIC17.1■□□□□ 0.33
EPHA4P54764 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.1■□□□□ 0.33
EPHA4P54764 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EPHA4P54764 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA4P54764 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.1■□□□□ 0.33
EPHA4P54764 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.1■□□□□ 0.33
EPHA4P54764 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.1■□□□□ 0.33
EPHA4P54764 HNRNPDP1-201ENST00000439535 754 ntBASIC17.1■□□□□ 0.33
EPHA4P54764 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.1■□□□□ 0.33
EPHA4P54764 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.1■□□□□ 0.33
EPHA4P54764 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.1■□□□□ 0.33
EPHA4P54764 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms