Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC25A1P53007 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC25A1P53007 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC25A1P53007 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 AL023973.1-201ENST00000624619 620 ntBASIC15.84■□□□□ 0.13
SLC25A1P53007 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC25A1P53007 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC25A1P53007 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC25A1P53007 BX276092.7-203ENST00000637198 1536 ntBASIC15.84■□□□□ 0.13
SLC25A1P53007 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC25A1P53007 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC25A1P53007 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC25A1P53007 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC25A1P53007 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC25A1P53007 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC25A1P53007 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SLC25A1P53007 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC25A1P53007 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SLC25A1P53007 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
SLC25A1P53007 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC25A1P53007 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC25A1P53007 TSPY12P-201ENST00000421279 868 ntBASIC15.83■□□□□ 0.12
SLC25A1P53007 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC25A1P53007 AC005104.2-201ENST00000427818 678 ntBASIC15.83■□□□□ 0.12
SLC25A1P53007 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC25A1P53007 HLA-F-220ENST00000434407 884 ntBASIC15.83■□□□□ 0.12
SLC25A1P53007 AC112698.1-201ENST00000510299 916 ntBASIC15.83■□□□□ 0.12
SLC25A1P53007 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.83■□□□□ 0.12
SLC25A1P53007 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 AC004263.2-201ENST00000617183 678 ntBASIC15.83■□□□□ 0.12
SLC25A1P53007 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC25A1P53007 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SLC25A1P53007 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC25A1P53007 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC25A1P53007 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 AD000864.1-201ENST00000624076 2295 ntBASIC15.82■□□□□ 0.12
SLC25A1P53007 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 SLC25A3P1-201ENST00000443844 931 ntBASIC15.82■□□□□ 0.12
SLC25A1P53007 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC25A1P53007 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC25A1P53007 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 AC016396.2-201ENST00000562575 1417 ntBASIC15.82■□□□□ 0.12
SLC25A1P53007 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC25A1P53007 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC25A1P53007 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
SLC25A1P53007 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC25A1P53007 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC25A1P53007 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC25A1P53007 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
SLC25A1P53007 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.81■□□□□ 0.12
SLC25A1P53007 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC25A1P53007 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SLC25A1P53007 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC25A1P53007 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms