Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TUBP50607 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TUBP50607 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBP50607 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 NUS1P2-201ENST00000417358 873 ntBASIC18.76■□□□□ 0.59
TUBP50607 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TUBP50607 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.76■□□□□ 0.59
TUBP50607 AC112698.1-201ENST00000510299 916 ntBASIC18.76■□□□□ 0.59
TUBP50607 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBP50607 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.76■□□□□ 0.59
TUBP50607 AC009533.2-201ENST00000543664 586 ntBASIC18.76■□□□□ 0.59
TUBP50607 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.76■□□□□ 0.59
TUBP50607 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.76■□□□□ 0.59
TUBP50607 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TUBP50607 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBP50607 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBP50607 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBP50607 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBP50607 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBP50607 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TUBP50607 AC026396.1-201ENST00000419388 421 ntBASIC18.75■□□□□ 0.59
TUBP50607 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.75■□□□□ 0.59
TUBP50607 AC096582.2-201ENST00000510860 516 ntBASIC18.75■□□□□ 0.59
TUBP50607 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.75■□□□□ 0.59
TUBP50607 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TUBP50607 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.75■□□□□ 0.59
TUBP50607 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.75■□□□□ 0.59
TUBP50607 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TUBP50607 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TUBP50607 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBP50607 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBP50607 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TUBP50607 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBP50607 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TUBP50607 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBP50607 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
TUBP50607 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
TUBP50607 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TUBP50607 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TUBP50607 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBP50607 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBP50607 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBP50607 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.74■□□□□ 0.59
TUBP50607 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBP50607 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBP50607 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 AC067852.2-201ENST00000590513 2313 ntBASIC18.74■□□□□ 0.59
TUBP50607 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 AC125634.1-201ENST00000438758 1403 ntBASIC18.74■□□□□ 0.59
TUBP50607 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TUBP50607 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TUBP50607 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBP50607 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBP50607 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBP50607 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBP50607 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TUBP50607 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBP50607 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TUBP50607 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBP50607 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBP50607 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms