Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
PCP4P48539 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
PCP4P48539 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.2□□□□□ -0.46
PCP4P48539 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PCP4P48539 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PCP4P48539 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PCP4P48539 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.2□□□□□ -0.46
PCP4P48539 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
PCP4P48539 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.2□□□□□ -0.46
PCP4P48539 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.2□□□□□ -0.46
PCP4P48539 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.2□□□□□ -0.46
PCP4P48539 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.2□□□□□ -0.46
PCP4P48539 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.2□□□□□ -0.46
PCP4P48539 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCP4P48539 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.19□□□□□ -0.46
PCP4P48539 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.19□□□□□ -0.46
PCP4P48539 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.19□□□□□ -0.46
PCP4P48539 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
PCP4P48539 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
PCP4P48539 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.19□□□□□ -0.46
PCP4P48539 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.19□□□□□ -0.46
PCP4P48539 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.19□□□□□ -0.46
PCP4P48539 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.19□□□□□ -0.46
PCP4P48539 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PCP4P48539 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PCP4P48539 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
PCP4P48539 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PCP4P48539 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.18□□□□□ -0.46
PCP4P48539 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms