Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 GCSHP2-201ENST00000560971 527 ntBASIC18.98■□□□□ 0.63
SSR1P43307 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SSR1P43307 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.97■□□□□ 0.63
SSR1P43307 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.97■□□□□ 0.63
SSR1P43307 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.97■□□□□ 0.63
SSR1P43307 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.97■□□□□ 0.63
SSR1P43307 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR1P43307 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SSR1P43307 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.97■□□□□ 0.63
SSR1P43307 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SSR1P43307 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SSR1P43307 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SSR1P43307 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SSR1P43307 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR1P43307 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR1P43307 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR1P43307 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SSR1P43307 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.96■□□□□ 0.63
SSR1P43307 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SSR1P43307 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR1P43307 TNRC18P3-201ENST00000441896 2691 ntBASIC18.96■□□□□ 0.63
SSR1P43307 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 LINC00896-202ENST00000609602 2128 ntBASIC18.95■□□□□ 0.62
SSR1P43307 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.95■□□□□ 0.62
SSR1P43307 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR1P43307 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.95■□□□□ 0.62
SSR1P43307 AC034232.1-201ENST00000506026 1064 ntBASIC18.95■□□□□ 0.62
SSR1P43307 AC010203.1-204ENST00000548782 407 ntBASIC18.95■□□□□ 0.62
SSR1P43307 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.95■□□□□ 0.62
SSR1P43307 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSR1P43307 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSR1P43307 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SSR1P43307 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.95■□□□□ 0.62
SSR1P43307 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSR1P43307 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms